BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G02LP1|AL425579
(207 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 354 3e-98
>3x_Contig1791
Length = 39945
Score = 354 bits (177), Expect = 3e-98
Identities = 198/207 (95%)
Strand = Plus / Plus
Query: 1 aacagcatgaatgcagcaatagstatacgcgtagagaccatttcgcaccaaccaaatttg 60
|||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 23423 aacagcatgaattcaccaatacctatacccgtagagaccatttcgcaccaaccaaatttg 23482
Query: 61 gagcgtgatattttcttgaatttggacttgcgtttgcctgactttaaaatgcgattatka 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 23483 gagcgtgatattttcttgaatttggacttgcgtttgcctgactttaaaatgcgattatga 23542
Query: 121 gcgttatgactctgattgaagtttgagtttgatatagaagtagacgcatgtkaatctact 180
|||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 23543 gcgtgatgactctgattgaagtttgagtttgatataaaagtagacgcatgtgaatctact 23602
Query: 181 gatgatacttgagggtctaacgccagt 207
|||||||||||||||||||||||||||
Sbjct: 23603 gatgatacttgagggtctaacgccagt 23629
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1250
Number of Sequences: 1807
Number of extensions: 1250
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 207
length of database: 10,358,551
effective HSP length: 15
effective length of query: 192
effective length of database: 10,331,446
effective search space: 1983637632
effective search space used: 1983637632
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.6 bits)